BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB039C05LP1|AL430673
(957 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1783 1721 0.0
3x_Contig1560 715 0.0
>3x_Contig1783
Length = 22123
Score = 1721 bits (867), Expect = 0.0
Identities = 869/871 (99%)
Strand = Plus / Minus
Query: 87 gtgaaagagaagaagctaaagacagaagcggcatgatattgaaaagtctagttgaatcga 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2335 gtgaaagagaagaagctaaagacagaagcggcatgatattgaaaagtctagttgaatcga 2276
Query: 147 gtatcaaatcgctccaggatccgatcgcctctcttgatgtgtcagaccttgccaccgatc 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2275 gtatcaaatcgctccaggatccgatcgcctctcttgatgtgtcagaccttgccaccgatc 2216
Query: 207 tttccaatgccttcatcgatggtgatatcaataccatagtcaatattctgcccgagtttg 266
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2215 tttccaatgccttcatcgatggtgatatcaataccatagtcaatattctgcccgagtttg 2156
Query: 267 tctcactactgctccgctgcccacaggagatgcagaccatagcagaagacttcttgcgat 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2155 tctcactactgctccgctgcccacaggagatgcagaccatagcagaagacttcttgcgat 2096
Query: 327 gcttatcctcggcaaagcagaccgattccgtgataaacgccaacattgcgttccaggaaa 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2095 gcttatcctcggcaaagcagaccgattccgtgataaacgccaacattgcgttccaggaaa 2036
Query: 387 agcttaagaggttgggtgaaattagacaatatagttacagatatggtgatagtgatgaag 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2035 agcttaagaggttgggtgaaattagacaatatagttacagatatggtgatagtgatgaag 1976
Query: 447 tataagamagttgtataggtagaaattagcactgtatattgtctaattatcaaatagacc 506
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1975 tataagaaagttgtataggtagaaattagcactgtatattgtctaattatcaaatagacc 1916
Query: 507 cgagctattttagctcgggtatttctttgatttacgtttagttcctttaccagtagtatg 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1915 cgagctattttagctcgggtatttctttgatttacgtttagttcctttaccagtagtatg 1856
Query: 567 ttttttagctctcattctcttgttagtaaaccatatcctaacttgagatggtgtcaaatc 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1855 ttttttagctctcattctcttgttagtaaaccatatcctaacttgagatggtgtcaaatc 1796
Query: 627 aagtttctgagcgatgtataatcgctcagaggtattaggacattgtttaactttgaagat 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1795 aagtttctgagcgatgtataatcgctcagaggtattaggacattgtttaactttgaagat 1736
Query: 687 cttttccagtattcctctggattcatgcttgatgaaggatcttttatatgttgggtagca 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1735 cttttccagtattcctctggattcatgcttgatgaaggatcttttatatgttgggtagca 1676
Query: 747 attttgaattggattatctgaatttgttgaagagatttctgatttatcagaaatatcttc 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1675 attttgaattggattatctgaatttgttgaagagatttctgatttatcagaaatatcttc 1616
Query: 807 tgaggtatcagtacactcgtgctctgtgtcgaatgacatgggagactcatctttgacgtc 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1615 tgaggtatcagtacactcgtgctctgtgtcgaatgacatgggagactcatctttgacgtc 1556
Query: 867 agaaatgttttctatatctgcatatcggagaattgaattgttgamatgctgttgcagagt 926
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1555 agaaatgttttctatatctgcatatcggagaattgaattgttgaaatgctgttgcagagt 1496
Query: 927 ttcaataatgcgagtagggtccagctgcaat 957
|||||||||||||||||||||||||||||||
Sbjct: 1495 ttcaataatgcgagtagggtccagctgcaat 1465
>3x_Contig1560
Length = 9209
Score = 715 bits (360), Expect = 0.0
Identities = 360/360 (100%)
Strand = Plus / Minus
Query: 88 tgaaagagaagaagctaaagacagaagcggcatgatattgaaaagtctagttgaatcgag 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8675 tgaaagagaagaagctaaagacagaagcggcatgatattgaaaagtctagttgaatcgag 8616
Query: 148 tatcaaatcgctccaggatccgatcgcctctcttgatgtgtcagaccttgccaccgatct 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8615 tatcaaatcgctccaggatccgatcgcctctcttgatgtgtcagaccttgccaccgatct 8556
Query: 208 ttccaatgccttcatcgatggtgatatcaataccatagtcaatattctgcccgagtttgt 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8555 ttccaatgccttcatcgatggtgatatcaataccatagtcaatattctgcccgagtttgt 8496
Query: 268 ctcactactgctccgctgcccacaggagatgcagaccatagcagaagacttcttgcgatg 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8495 ctcactactgctccgctgcccacaggagatgcagaccatagcagaagacttcttgcgatg 8436
Query: 328 cttatcctcggcaaagcagaccgattccgtgataaacgccaacattgcgttccaggaaaa 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8435 cttatcctcggcaaagcagaccgattccgtgataaacgccaacattgcgttccaggaaaa 8376
Query: 388 gcttaagaggttgggtgaaattagacaatatagttacagatatggtgatagtgatgaagt 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8375 gcttaagaggttgggtgaaattagacaatatagttacagatatggtgatagtgatgaagt 8316
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7741
Number of Sequences: 1807
Number of extensions: 7741
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 2
length of query: 957
length of database: 10,358,551
effective HSP length: 16
effective length of query: 941
effective length of database: 10,329,639
effective search space: 9720190299
effective search space used: 9720190299
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)